Comments on: GGPUBR: How to Add P-Values Generated Elsewhere to a GGPLOT https://www.datanovia.com/en/blog/ggpubr-how-to-add-p-values-generated-elsewhere-to-a-ggplot/ Data Mining and Statistics for Decision Support Tue, 10 Sep 2024 08:32:51 +0000 hourly 1 https://wordpress.org/?v=6.8.2 By: Ele https://www.datanovia.com/en/blog/ggpubr-how-to-add-p-values-generated-elsewhere-to-a-ggplot/#comment-29241 Tue, 10 Sep 2024 08:32:51 +0000 https://www.datanovia.com/en/?p=16062#comment-29241 In reply to Gustavo.

Hi Gustavo, have you ever worked out a solution? I am trying to do the same

]]> By: Miya https://www.datanovia.com/en/blog/ggpubr-how-to-add-p-values-generated-elsewhere-to-a-ggplot/#comment-29188 Mon, 17 Jun 2024 14:44:57 +0000 https://www.datanovia.com/en/?p=16062#comment-29188 In reply to Gustavo.

Did you have any answer to this post, please?

]]> By: Gustavo https://www.datanovia.com/en/blog/ggpubr-how-to-add-p-values-generated-elsewhere-to-a-ggplot/#comment-22093 Fri, 11 Jun 2021 09:03:32 +0000 https://www.datanovia.com/en/?p=16062#comment-22093 Dear Kassambara,

Great tutorial, thanks for sharing!

I’d like to use stat_pvalue_manual() to include emmeans posthoc tests to my analysis. However, it doesn’t work the same way you described because emmeans produces a emmGrid as a result, and not a table like the t-test() here.

I noticed that there is a function that is based on rstatix called emmeans_test. This one produces a table so I guess it could be used instead of emmeans. How similar would emmeans and emmeans_test be? And do you know by any chance why I get the following error message when I try to run emmeans_test?

> df %>% emmeans_test(len ~ dose, p.adjust.method = “bonferroni”)
Error: Column name `std.error` must not be duplicated.
Use .name_repair to specify repair.

Many thanks!! Cheers, Gustavo

]]> By: Luana M Simao https://www.datanovia.com/en/blog/ggpubr-how-to-add-p-values-generated-elsewhere-to-a-ggplot/#comment-21895 Tue, 20 Apr 2021 01:07:11 +0000 https://www.datanovia.com/en/?p=16062#comment-21895 What would it be the numbers on the function “mutate(y.position = rep(c…”?

]]> By: kassambara https://www.datanovia.com/en/blog/ggpubr-how-to-add-p-values-generated-elsewhere-to-a-ggplot/#comment-20473 Tue, 02 Jun 2020 06:36:33 +0000 https://www.datanovia.com/en/?p=16062#comment-20473 In reply to Xiaochi Liu.

Thank you Xiaochi Liu for your positive feedback. The total height corresponds to the y-axis scale range (ymax-ymin)

]]> By: Xiaochi Liu https://www.datanovia.com/en/blog/ggpubr-how-to-add-p-values-generated-elsewhere-to-a-ggplot/#comment-20472 Mon, 01 Jun 2020 13:17:12 +0000 https://www.datanovia.com/en/?p=16062#comment-20472 Hello Kassambara,

Many thanks for your tutorial. It’s very helpful.

In the document, “step.increase” argument means numeric vector with the increase in fraction of total height for every additional comparison to minimize overlap; and “tip.length” means numeric vector with the fraction of total height that the bar goes down to indicate the precise column.

I was wondering, what is the “total height” in these two arguments’ definition? Could you please explain more about it?

Many thanks for your help!

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